concept-browser/docker-compose.dev.yaml at dev · bioinformatics-ua/concept-browser · GitHub

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services:
  database:
    image: postgres:17.2-alpine3.20
    restart: unless-stopped
    env_file:
      - .env
    ports:
      - "5432:5432"
    volumes:
      - postgres_data:/var/lib/postgresql/data
    healthcheck:
      test: [ "CMD", "pg_isready", "-U", "${POSTGRES_USER}", "-d", "${POSTGRES_DB}" ]
      interval: 10s
      timeout: 30s
      retries: 5
      start_period: 30s

  backend:
    build:
      context: ./backend
      dockerfile: docker/Dockerfile
    restart: unless-stopped

    healthcheck:
      test: [ "CMD", "curl", "-f", "http://localhost:8000/health" ]
      interval: 30s
      timeout: 30s
      retries: 5
      start_period: 30s

    depends_on:
      database:
        condition: service_healthy

    env_file:
      - .env
    volumes:
      - ./backend:/app
    ports:
      - "8000:8000"

  data_loader:
    build:
      context: ./data_loader
      dockerfile: Dockerfile
    restart: "no"
    env_file:
      - .env
    depends_on:
      database:
        condition: service_healthy
      backend:
        condition: service_healthy
    volumes:
      # Concept Related Information
      - ./data/rxnorm/CONCEPT.csv:/data/rxnorm/CONCEPT.csv:ro
      - ./data/rxnorm/CONCEPT_ANCESTOR.csv:/data/rxnorm/CONCEPT_ANCESTOR.csv:ro
      - ./data/rxnorm/RELATIONSHIP.csv:/data/rxnorm/RELATIONSHIP.csv:ro
      - ./data/rxnorm/CONCEPT_RELATIONSHIP.csv:/data/rxnorm/CONCEPT_RELATIONSHIP.csv:ro
      # Feasibility Information
      - ./data/achilles_results-04-02.csv:/data/achilles_results-04-02.csv:ro
      - ./data/data_source-04-02.csv:/data/data_source-04-02.csv:ro
      - ./data/countries.csv:/data/countries.csv:ro

  frontend:
    build:
      context: ./frontend
      dockerfile: docker/Dockerfile
      args:
        - BUILD_NPM_TOKEN=${BUILD_NPM_TOKEN}
        - DEV_MODE=True
        - STANDALONE_MODE=${SINGLE_COMMUNITY_MODE}
        - KEYCLOAK_URL=${KEYCLOAK_PROXY_URL}
        - COMMUNITY_KEY=${COMMUNITY_KEY}
        - API_URL=${PUBLIC_API_URL}
    restart: unless-stopped
    env_file:
      - .env
    depends_on:
      backend:
        condition: service_healthy
      data_loader:
        condition: service_completed_successfully
    volumes:
      - ./frontend:/frontend
      - /frontend/node_modules
    ports:
      - "3000:3000"

volumes:
  postgres_data: