Skip to content

Setting up new component with appropriate defaults #82

@mumichae

Description

@mumichae

Is your feature request related to a problem? Please describe.
When creating new components, the corresponding script from common gets called without any task-specific parameters

https://github.com/openproblems-bio/task_batch_integration/tree/main/scripts/create_component

However, there are crucial parameters should would be missed for users adding new methods or metrics.

Describe the solution you'd like
A way to set up default info parameters (or prompting the user) so that important parameters are instantiated from the beginning

e.g. parameters from combat

info:
method_types: [feature]
preferred_normalization: log_cp10k
variants:
combat_full_unscaled:
combat_full_scaled:
preferred_normalization: log_cp10k_scaled

most often, method_types is missing and the use of variants remains unknown

Metadata

Metadata

Assignees

Labels

enhancementNew feature or request

Type

No type
No fields configured for issues without a type.

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions