Issues

• Document and restore test coverage for historical clade assignments

  reichlab/cladetime#185 · Filter by author trobacker opened on Dec 5, 2025

• Unit tests fail now without Nextstrain metadata archives

  reichlab/cladetime#182 · Filter by author trobacker opened on Nov 4, 2025

• CladeTime needs fallback to Hub archives for historical metadata (July-Sept 2025)

  reichlab/cladetime#179 · Filter by author trobacker opened on Nov 1, 2025
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• CI test fails with Polars 1.29.0: test_filter_metadata_state_name

  reichlab/cladetime#146 · Filter by author bsweger opened on May 17, 2025
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• Remove unused function from Cladetime

  reichlab/cladetime#103 · Filter by author bsweger opened on Mar 21, 2025

• Investigate: are the Nextclade CLI containers that Cladetime pulls from Docker cached?

  reichlab/cladetime#96 · Filter by author bsweger opened on Feb 27, 2025 · Variant Nowcast
  

• Update Cladetime tests to run on all supported operating systems and Python versions

  reichlab/cladetime#95 · Filter by author bsweger opened on Feb 26, 2025
  

• Tidy up cladetime logs and warning formats

  reichlab/cladetime#56 · Filter by author bsweger opened on Nov 12, 2024 · Variant Nowcast
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