From be8dd5cff69b7b37eaec64b81e9a2b68b5b62955 Mon Sep 17 00:00:00 2001 From: philinscience Date: Wed, 17 Jun 2026 16:14:02 +0200 Subject: [PATCH 1/2] Add cellpin --- packages/cellpin/meta.yaml | 21 +++++++++++++++++++++ 1 file changed, 21 insertions(+) create mode 100644 packages/cellpin/meta.yaml diff --git a/packages/cellpin/meta.yaml b/packages/cellpin/meta.yaml new file mode 100644 index 0000000..10d3ac4 --- /dev/null +++ b/packages/cellpin/meta.yaml @@ -0,0 +1,21 @@ +name: cellpin +description: cellpin is a lightweight probabilistic model that reconstructs and denoises spatial transcriptomes from single-cell RNA-seq references. It enables transcriptome-wide imputation, robust atlas-to-spatial label-transfer, and improved biological interpretation of both targeted-panel and full-transcriptome spatial datasets. +project_home: https://github.com/Saur-Lab/cellpin +documentation_home: https://cellpin.readthedocs.io/ +tutorials_home: https://cellpin.readthedocs.io/en/latest/notebooks/cellpin_tutorial.html +install: + pypi: cellpin +license: MIT +tags: + - spatial-transcriptomics + - single-cell + - transcriptome-imputation + - label-transfer +publications: + - 10.64898/2026.06.02.729566 +version: 0.1.1 +contact: + - philinscience + - MDLDan +test_command: uv sync --group test && uv run pytest +category: ecosystem From 9f1a10fc04d2240d5ad993253e78aa7e535d5380 Mon Sep 17 00:00:00 2001 From: philinscience Date: Wed, 17 Jun 2026 16:26:26 +0200 Subject: [PATCH 2/2] fix tutorial link --- packages/cellpin/meta.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/packages/cellpin/meta.yaml b/packages/cellpin/meta.yaml index 10d3ac4..ddf5dfe 100644 --- a/packages/cellpin/meta.yaml +++ b/packages/cellpin/meta.yaml @@ -2,7 +2,7 @@ name: cellpin description: cellpin is a lightweight probabilistic model that reconstructs and denoises spatial transcriptomes from single-cell RNA-seq references. It enables transcriptome-wide imputation, robust atlas-to-spatial label-transfer, and improved biological interpretation of both targeted-panel and full-transcriptome spatial datasets. project_home: https://github.com/Saur-Lab/cellpin documentation_home: https://cellpin.readthedocs.io/ -tutorials_home: https://cellpin.readthedocs.io/en/latest/notebooks/cellpin_tutorial.html +tutorials_home: https://cellpin.readthedocs.io/ install: pypi: cellpin license: MIT