Add Stage 1 checkpoint reuse boundary#1076
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Fixes #1074
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Validation
uv run --no-sync pytest tests/unit/test_build_dataset_checkpoints.py tests/unit/test_build_dataset_rerun.py tests/unit/test_dataset_build_stage_contract.py tests/unit/test_modal_data_build.py tests/unit/test_pipeline_doc_guards.py tests/unit/test_pipeline_docs_extractor.pyuv run --no-sync --with pyyaml python scripts/run_quality_guards.pyuv run --no-sync --with pyyaml python scripts/extract_pipeline_docs.py --json /private/tmp/stage1-pr4-docs/pipeline_map.json --api-json /private/tmp/stage1-pr4-docs/pipeline_api.json --markdown /private/tmp/stage1-pr4-docs/pipeline-map.mdmake lint